npx skills add smithery/gptomics --skill bio-single-cell-lineage-tracing
gptomics/bioskills · Archived
bio-single-cell-lineage-tracing
Reconstructs single-cell lineage trees and clonal relationships from CRISPR/Cas9 scars, static expressed barcodes (LARRY/CellTag), or somatic mtDNA mutations…
Installation
npx skills add https://github.com/gptomics/bioskills
Stronger alternatives
This repository is archived — consider an actively maintained alternative.
Installs 425 bioinformatics skills covering sequence analysis, RNA-seq, single-cell, variant ca…
243 installsInstalls 425 bioinformatics skills covering sequence analysis, RNA-seq, single-cell, variant ca…
10 installsIntegrate multiple scRNA-seq samples or batches with Harmony, scVI/scANVI, Seurat (CCA/RPCA), f…
7 installsOrchestrates the end-to-end bulk RNA-seq differential-expression pipeline from FASTQ to an anno…
6 installsSimilar popular skills
Related neighbors and high-traction skills in the same topics — useful to compare before installing.
Analyzes the downstream impact (blast radius) when a BigQuery table or view is broken, stale, o…
3.8K installsdatalineage-summary Installation Command Prompt $ npx skills add https://github.com/google/skil…
2.6K installsTrace upstream data lineage. Use when the user asks where data comes from, what feeds a table, …
980 installsTrace downstream data lineage and impact analysis. Use when the user asks what depends on this …
956 installsAnnotate Airflow tasks with data lineage using inlets and outlets. Use when the user wants to a…
901 installsCreate custom OpenLineage extractors for Airflow operators. Use when the user needs lineage fro…
867 installsAlso in this package
Other skills from gptomics/bioskills · top by installs.
npx skills add https://github.com/gptomics/bioskills
More details
Agent compatibility
Declared targets from SKILL.md / docs. Unmarked agents are not listed — the skill may still install via the CLI.
Also listed on
Alternate registries and mirrors of this skill.
Repository health
main
History
- First seen on skills.sh
- First recorded snapshot · 4 installs