npx skills add smithery/gptomics --skill bio-read-qc-fastp-workflow
gptomics/bioskills · Archived
bio-read-qc-fastp-workflow
All-in-one read preprocessing with fastp including adapter trimming, quality filtering, deduplication, base correction, and HTML report generation. Use when…
Installation
$
npx skills add https://github.com/gptomics/bioskills
Stronger alternatives
This repository is archived — consider an actively maintained alternative.
bioskills
Same source · more installs
gptomics/bioskills
Installs 425 bioinformatics skills covering sequence analysis, RNA-seq, single-cell, variant ca…
243 installs
clawhub-installer
Same source · more installs
gptomics/bioskills
Installs 425 bioinformatics skills covering sequence analysis, RNA-seq, single-cell, variant ca…
10 installs
bio-single-cell-batch-integration
Same source · more installs
gptomics/bioskills
Integrate multiple scRNA-seq samples or batches with Harmony, scVI/scANVI, Seurat (CCA/RPCA), f…
7 installs
bio-workflows-rnaseq-to-de
Same source · more installs
gptomics/bioskills
Orchestrates the end-to-end bulk RNA-seq differential-expression pipeline from FASTQ to an anno…
6 installsSimilar popular skills
Related neighbors and high-traction skills in the same topics — useful to compare before installing.
expo-cicd-workflows
Similar name
expo/skills
Helps understand and write EAS workflow YAML files for Expo projects. Use this skill when the u…
39.2K installs
gws-workflow
Similar name
googleworkspace/cli
Google Workflow: Cross-service productivity workflows.
92 installs
firecrawl-workflows
Similar name
firecrawl/firecrawl-workflows
Run outcome-focused Firecrawl workflows that produce deliverables such as research reports, lit…
28 installs
gws-workflow-email-to-task
Similar name
googleworkspace/cli
Google Workflow: Convert a Gmail message into a Google Tasks entry.
81 installs
gws-workflow-meeting-prep
Similar name
googleworkspace/cli
Google Workflow: Prepare for your next meeting: agenda, attendees, and linked docs.
83 installs
gws-workflow-weekly-digest
Similar name
googleworkspace/cli
Google Workflow: Weekly summary: this week's meetings + unread email count.
83 installsAlso in this package
Other skills from gptomics/bioskills · top by installs.
npx skills add https://github.com/gptomics/bioskills
bioskills
243
clawhub-installer
10
bio-single-cell-batch-integration
7
bio-workflows-rnaseq-to-de
6
bio-workflows-scrnaseq-pipeline
6
bio-metagenomics-kraken
5
bio-pathway-reactome
5
bio-data-visualization-genome-tracks
5
bio-data-visualization-specialized-omics-plots
5
bio-data-visualization-multipanel-figures
5
More details
Agent compatibility
Declared targets from SKILL.md / docs. Unmarked agents are not listed — the skill may still install via the CLI.
Claude Code
Not declared
Cursor
Not declared
Codex
Not declared
GitHub Copilot
Not declared
Windsurf
Not declared
Gemini CLI
Not declared
Cline
Not declared
OpenCode
Not declared
Also listed on
Alternate registries and mirrors of this skill.
Repository health
Stars
1.2K
License
LICENSE
Default branch
main
Open issues
0
Status
Archived
History
- First seen on skills.sh
- First recorded snapshot · 5 installs