gptomics/bioskills · Archived
bio-single-cell-cnv-inference
Infer large-scale copy-number alterations from tumor single-cell or single-nucleus RNA-seq to separate malignant from normal cells and call subclones, using…
Installation
npx skills add https://github.com/gptomics/bioskills
Stronger alternatives
This repository is archived — consider an actively maintained alternative.
Installs 425 bioinformatics skills covering sequence analysis, RNA-seq, single-cell, variant ca…
243 installsInstalls 425 bioinformatics skills covering sequence analysis, RNA-seq, single-cell, variant ca…
10 installsIntegrate multiple scRNA-seq samples or batches with Harmony, scVI/scANVI, Seurat (CCA/RPCA), f…
7 installsOrchestrates the end-to-end bulk RNA-seq differential-expression pipeline from FASTQ to an anno…
6 installsSimilar popular skills
Related neighbors and high-traction skills in the same topics — useful to compare before installing.
Start, query, and stop a network-specific TAO inference microservice ({network_arch}-inference-…
1.5K installsPick the serving stack and per-runtime memory flags (vLLM, SGLang, llama.cpp, TensorRT Edge-LLM…
1.1K installsConnects to and performs inference with Google Cloud Agent Platform GenAI models, including Fir…
5.6K installsDeploys and optimizes AI/ML inference workloads on GKE, using GPUs, TPUs, and model servers. Us…
4K installs>- MANDATORY recipe for every Caffeine build that calls an LLM, chatbot, GPT, or ChatGPT **on C…
2.5K installsInspect the availability of model serving on a completed Itô compute booking and, when the cano…
1.1K installsAlso in this package
Other skills from gptomics/bioskills · top by installs.
npx skills add https://github.com/gptomics/bioskills
More details
Agent compatibility
Declared targets from SKILL.md / docs. Unmarked agents are not listed — the skill may still install via the CLI.
Repository health
main
History
- First seen on skills.sh
- First recorded snapshot · 2 installs