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gptomics/bioskills · Archived

bio-single-cell-cell-annotation

Automated reference-based cell type annotation for single-cell RNA-seq using CellTypist, SingleR, Azimuth, scANVI, and scmap to transfer labels from a…

First seen Jan 24, 2026

Installation

$ npx skills add https://github.com/gptomics/bioskills
View on skills.sh ↗ GitHub repository ↗

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Also in this package

Other skills from gptomics/bioskills · top by installs.

npx skills add https://github.com/gptomics/bioskills
bioskills 243 clawhub-installer 10 bio-single-cell-batch-integration 7 bio-workflows-rnaseq-to-de 6 bio-workflows-scrnaseq-pipeline 6 bio-metagenomics-kraken 5 bio-pathway-reactome 5 bio-data-visualization-genome-tracks 5 bio-read-qc-fastp-workflow 5 bio-data-visualization-specialized-omics-plots 5

Browse all from gptomics/bioskills

More details

Agent compatibility

Declared targets from SKILL.md / docs. Unmarked agents are not listed — the skill may still install via the CLI.

Claude Code Not declared
Cursor Not declared
Codex Not declared
GitHub Copilot Not declared
Windsurf Not declared
Gemini CLI Not declared
Cline Not declared
OpenCode Not declared

Also listed on

Alternate registries and mirrors of this skill.

Repository health

Stars 1.2K
License LICENSE
Default branch main
Open issues 0
Status Archived

History

  1. First seen on skills.sh
  2. First recorded snapshot · 4 installs