yuan1z0825/nature-skills

nature-literature-pipeline

Complete automated literature discovery pipeline: multi-source search → six-dimension scoring → fine reading → formatted delivery → archival. Combines a configurable engine with daily cron-driven application layer. Works with Feishu, Telegram, or any messaging platform.

All-time #2121 Trending #944 Hot #6307 First seen Jun 30, 2026
8-week activity · all time api

Installation

$ npx skills add yuan1z0825/nature-skills --skill nature-literature-pipeline

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Agent compatibility

Declared targets from SKILL.md / docs. Unmarked agents are not listed — the skill may still install via the CLI.

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Repository health

Stars 40.2K
License LICENSE
Default branch main
Open issues 0
Status Active

Skill metadata

Parsed from SKILL.md frontmatter.

LicenseMIT
More metadata
author
Jiahao8595
hermes
{"tags":["research","literature","pipeline","cron","automation","discovery"],"related_skills":["nature-academic-search","nature-citation","arxiv","zotero"]}

Package contents

Files included with this skill beyond the listing page.

  • skill md SKILL.md 4,770 B
  • docs README.md 2,111 B
  • docs SUMMARY.md 312 B

History

  1. First seen on skills.sh
  2. First recorded snapshot · 7,300 installs

Videos

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SKILL.md

Nature Literature Pipeline

A complete, production-tested automated literature pipeline. Not just "search for papers" — it's a structured engine that scores, classifies, reads, delivers, and archives research papers daily.

What It Does

Cron (daily trigger, e.g. 08:30)
  │
  ├─ ① SEARCH (30 candidates)
  │   arXiv / OpenAlex / Crossref / Semantic Scholar (auto-degradation)
  │
  ├─ ② COARSE FILTER (30 → 5)
  │   Six-dimension scoring: topic match × 35 + methodology × 20
  │   + journal quality × 15 + network relevance × 10
  │   + applied value × 10 + archival value × 10
  │
  ├─ ③ FINE READ (top 5)
  │   Abstract-level or full-text. Source level tagged:
  │   Full-text / Abstract only / Metadata only
  │
  ├─ ④ DELIVER
  │   Formatted digest to Feishu/Telegram/etc.
  │   🏅 rank | title | journal | ⭐ score | 💡 one-liner
  │   🔬 methods | 📊 key results | 🧭 commentary
  │
  └─ ⑤ ARCHIVE
      DOI/arXiv de-dup → classify → write notes → update index

Quick Start

After installing, tell your agent:

My research area is [X], keywords: [Y], deliver to [feishu group name], archive to [path]

The agent will configure keywords, delivery target, and archive path automatically.

Then set up a daily cron job:

Set up a daily literature push at 08:30 Beijing time, 30 candidates, top 5 delivered

Architecture

The skill is organized in two layers:

Layer Purpose Files
Engine Scoring, classification, note templates, gap analysis references/scoring-system.md, references/gap-analysis.md, references/note-template.md
Application Daily cron pipeline, delivery formatting, archival workflow references/push-format.md, references/cron-setup.md, references/review-compilation-workflow.md

Configuration

All domain-specific content is configurable:

  • Keywords — your research keywords (English + Chinese)
  • Scoring weights — adjust the six dimensions for your field
  • Classification rules — define your own tier system (A-E or custom)
  • Delivery target — Feishu group, Telegram channel, email, etc.
  • Archive path — local vault/wiki directory

A config template is provided in templates/literature-push-template.md.

Built-in Safeguards

  • Score validation: Each dimension capped, total recalculated — no 11/10 allowed
  • Triple de-duplication: DOI / arXiv ID / OpenAlex ID
  • Graceful degradation: Semantic Scholar down → auto-switch to OpenAlex + Crossref + arXiv
  • Read-only archive: Daily pipeline writes to raw/ literature directory only; never modifies wiki/knowledge base without user approval

Related Skills

  • nature-academic-search — ad-hoc literature search (complementary; this skill adds structured daily automation)
  • nature-citation — CNS citation export (for importing pipeline discoveries into manuscripts)
  • zotero — library management (for long-term organization of pipeline outputs)
  • arxiv — arXiv API (used as a search source)

References

Reference Purpose
references/scoring-system.md Six-dimension scoring rubric with weights, caps, and evaluation logic
references/gap-analysis.md Methodology for identifying research gaps through systematic literature survey
references/note-template.md Standardized literature note format with YAML frontmatter
references/push-format.md Daily digest message template with field guidelines and example
references/cron-setup.md Cron job creation, verification, and manual fallback procedures
references/review-compilation-workflow.md End-to-end workflow for concentrated literature review writing

Pitfalls

  1. Keyword drift: Review keywords monthly — research directions evolve
  2. Score inflation: Subagents may inflate scores; always validate arithmetic
  3. Duplicate creep: Classic papers will reappear; maintain a dedup index
  4. Wiki safety: Pipeline writes to raw/ only; wiki integration is manual
  5. Cron locality: Hermes cron is local, not cloud — machine must be running