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Skill

Source

Installs

agentuity--cloud-thread-list site/smithery.ai/agentuity--cloud-thread-list List recent threads. Requires authentication. Use for Agentuity cloud platform operations

agentuity--cloud-vector-delete site/smithery.ai/agentuity--cloud-vector-delete Delete one or more vectors by key. Requires authentication. Use for Agentuity cloud platform operations

agentuity--cloud-vector-list-namespaces site/smithery.ai/agentuity--cloud-vector-list-namespaces List all vector namespaces. Requires authentication. Use for Agentuity cloud platform operations

agentuity--cloud-vector-stats site/smithery.ai/agentuity--cloud-vector-stats Get statistics for vector storage. Requires authentication. Use for Agentuity cloud platform operations

agentuity--dev site/smithery.ai/agentuity--dev Build and run the development server

agentuity--git-account-add site/smithery.ai/agentuity--git-account-add Add a GitHub account to your organization. Requires authentication

agentuity--git-account-list site/smithery.ai/agentuity--git-account-list List GitHub accounts connected to your organizations. Requires authentication

agentuity--git-link site/smithery.ai/agentuity--git-link Link a project to a GitHub repository. Requires authentication

agentuity--git-list site/smithery.ai/agentuity--git-list List GitHub repositories accessible to your organization. Requires authentication

agentuity--profile-create site/smithery.ai/agentuity--profile-create Create a new configuration profile

agentuity--profile-current site/smithery.ai/agentuity--profile-current Show the name of the currently active profile

agentuity--profile-delete site/smithery.ai/agentuity--profile-delete Delete a configuration profile

agentuity--profile-list site/smithery.ai/agentuity--profile-list List all available profiles

agentuity--profile-show site/smithery.ai/agentuity--profile-show Show the configuration of a profile

agentuity--profile-use site/smithery.ai/agentuity--profile-use Switch to a different configuration profile

agentuity--project-auth-generate site/smithery.ai/agentuity--project-auth-generate Generate SQL schema for Agentuity Auth tables. Use for managing authentication credentials

agentuity--project-auth-init site/smithery.ai/agentuity--project-auth-init Set up Agentuity Auth for your project. Requires authentication. Use for managing authentication credentials

agentuity--project-import site/smithery.ai/agentuity--project-import Import or register a local project with Agentuity Cloud. Requires authentication. Use for project management operatio…

agentuity--project-list site/smithery.ai/agentuity--project-list List all projects. Requires authentication. Use for project management operations

agentuity--project-show site/smithery.ai/agentuity--project-show Show project detail. Requires authentication. Use for project management operations

agentuity--repl site/smithery.ai/agentuity--repl interactive REPL for testing

ai-cross-verifier site/smithery.ai/ai-cross-verifier Cross-verify Claude-generated plans and code using OpenAI Codex and Google Gemini .

ai-organizer-ui-consolidation site/smithery.ai/ai-organizer-ui-consolidation Build a unified, ADHD-friendly web UI that consolidates 70+ tools into a beautiful liquid glass interface for the…

ai-summary-request site/smithery.ai/ai-summary-request Adds an "AI Summary Request" footer component with ckable AI platform icons (ChatGPT, Claude, Gemini, Grok, Perple…

angular-modernization site/smithery.ai/angular-modernization Modernizes Angular code such as components and directives to follow best practices using both automatic migration…

api-builder site/smithery.ai/api-builder Generate complete FastAPI backend scaffolds from OpenAPI 3.x specifications. Automatically creates SQLAlchemy models,…

ask-kimi site/smithery.ai/ask-kimi Kimi に意見を聞く、セカンドオピニオンを求める。コードレビュー、設計相談、アーキテクチャの相談、別のAIの意見が欲し…

atr-browser site/smithery.ai/atr-browser Control browser, automate browser interactions, navigate to URLs, ck on webpages, fill forms, take screenshots, in…

b2c-logs site/smithery.ai/b2c-logs Retrieve and search logs from B2C Commerce instances using the b2c .

b2c-site-import-export site/smithery.ai/b2c-site-import-export Import and export site archives containing metadata XML on B2C Commerce instances using the b2c . Use this skill w…

b2c-sites site/smithery.ai/b2c-sites List storefront sites, check site status, and manage cartridge paths on B2C Commerce instances using the b2c . Use…

baoyu-url-to-markdown site/smithery.ai/baoyu-url-to-markdown Fetch any URL and convert to markdown using baoyu-fetch (Chrome CDP with site-specific adapters).

bio-nical-databases-dbsnp-queries site/smithery.ai/bio-nical-databases-dbsnp-queries Resolves rsIDs, navigates RsMergeArch/SNPHistory merge chains, and converts between rsID, SPDI, HGVS, and VCF represe…

bio-nical-databases-gnomad-frequencies site/smithery.ai/bio-nical-databases-gnomad-frequencies Queries gnomAD v4 (807k samples), v3, v2.1.1, and constraint metrics with grpmax FAF95, bottleneck-group exclusion, L…

bio-nical-databases-myvariant-queries site/smithery.ai/bio-nical-databases-myvariant-queries Queries myvariant.info BioThings aggregator for nVar, gnomAD, dbSNP, dbNSFP, COSMIC, CADD, and CIViC annotations i…

bio-nical-databases-pharmacogenomics site/smithery.ai/bio-nical-databases-pharmacogenomics Queries PharmGKB / CPIC / DPWG for drug-gene interactions; calls CYP2D6/CYP2C9/CYP2C19/DPYD/TPMT/NUDT15/UGT1A1/SLCO1B…

bio-nical-databases-polygenic-risk site/smithery.ai/bio-nical-databases-polygenic-risk Constructs and validates polygenic risk scores using LDpred2-auto, SBayesRC, MegaPRS, PRS-CS, PROSPER, MUSSEL, Bridge…

bio-nical-databases-somatic-signatures site/smithery.ai/bio-nical-databases-somatic-signatures Extracts and assigns COSMIC v3.4 mutational signatures (86 SBS / 11 DBS / 18 ID / 21 CN / 16 SV) from somatic VCFs us…

bio-nical-databases-tumor-mutational-burden site/smithery.ai/bio-nical-databases-tumor-mutational-burden Calculates tumor mutational burden from WES/WGS/panel data with Friends of Cancer Research harmonization equations, p…

bio-nical-databases-variant-prioritization site/smithery.ai/bio-nical-databases-variant-prioritization Prioritizes rare-disease variants from trio/quad WES/WGS with de novo (DeNovoGear, Triodenovo), compound-heterozygous…

bio-copy-number-cnv-annotation site/smithery.ai/bio-copy-number-cnv-annotation Annotate copy number variant segments with overlapping genes, dosage-sensitivity scores, cancer driver databases, pop…

bio-experimental-design-power-analysis site/smithery.ai/bio-experimental-design-power-analysis Calculates statistical power for high-dimensional genomics experiments (bulk RNA-seq, scRNA-seq, ATAC-seq, ChIP-seq, …

bio-experimental-design-sample-size site/smithery.ai/bio-experimental-design-sample-size Estimates the minimum biological replicates (or cells/events) for a target power at a target FDR in genomics experime…

bio-expression-matrix-gene-id-mapping site/smithery.ai/bio-expression-matrix-gene-id-mapping Maps between gene identifier systems (Ensembl, Entrez, HGNC symbol, UniProt, RefSeq, MANE) using AnnotationDbi, bioma…

bio-genome-intervals-proximity-operations site/smithery.ai/bio-genome-intervals-proximity-operations Performs proximity operations on genomic intervals with bedtools (closest, window, flank, slop) and pybedtools - near…

bio-hi-c-analysis-hic-data-io site/smithery.ai/bio-hi-c-analysis-hic-data-io Loads, converts, and manipulates Hi-C contact matrices in cooler format (.cool/.mcool/.scool) and Juicer .hic, using …

bio-hi-c-analysis-hic-visualization site/smithery.ai/bio-hi-c-analysis-hic-visualization Renders Hi-C contact matrices honestly and reproducibly with matplotlib, cooltools, HiCExplorer, pyGenomeTracks, FAN-…

bio-read-alignment-bowtie2-alignment site/smithery.ai/bio-read-alignment-bowtie2-alignment Aligns DNA short reads to a reference with Bowtie2, choosing end-to-end (whole read must align) vs local (soft-p r…

bio-read-alignment-bwa-alignment site/smithery.ai/bio-read-alignment-bwa-alignment Aligns DNA short reads (paired- or single-end) to a reference genome with bwa-mem2, the maintained successor to BWA-M…

bit- site/smithery.ai/bit- MUST consult before running ANY bit command. Do NOT guess bit commands from memory. This skill tells you the right co…