pedrohcgs/claude-code-my-workflow

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validate-bib Validate bibliography entries against citations in all lecture files. Structural checks (missing/unused entries, malf…

pedrohcgs/claude-code-my-workflow

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pedagogy-review Holistic pedagogical review of a lecture deck (`.qmd` or `.tex`). Checks narrative arc, prerequisite assumptions, wor…

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create-lecture Create a new Beamer lecture `.tex` from source papers and materials, with notation consistency checks and the project…

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data-analysis End-to-end R data analysis pipeline — exploration → cleaning → regression → publication-ready tables and figures. Use…

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proofread Read-only proofreading pass over lecture `.tex` or `.qmd` files.

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compile-latex Compile a Beamer LaTeX slide deck with XeLaTeX (3 passes + bibtex). Use when user says "compile", "build the slides",…

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lit-review Structured literature search + synthesis with citation extraction, thematic clustering, and gap identification.

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research-ideation Generate structured research questions, testable hypotheses, and candidate empirical strategies from a topic, phenome…

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review-r Read-only R code review protocol for `.R` scripts. Checks code quality, reproducibility, domain correctness, tidyvers…

pedrohcgs/claude-code-my-workflow

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audit-reproducibility Enforce the replication-protocol.md rule by cross-checking numeric claims in a manuscript against the actual R / Stat…

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devils-advocate Adversarial 5-7 question challenge to a deck's pedagogical choices — ordering, prerequisites, cognitive load, motivat…

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slide-excellence Multi-agent comprehensive slide review (visual + pedagogy + proofreading, plus TikZ / parity / substance conditionall…

pedrohcgs/claude-code-my-workflow

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context-status Show current context status and session health. Use to check how much context has been used, whether auto-compact is …

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visual-audit Adversarial visual-layout audit of a Quarto `.qmd` or Beamer `.tex` deck.

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extract-tikz Extract TikZ diagrams from Beamer `.tex` source, compile each to a standalone PDF, and convert to SVG with 0-based in…

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qa-quarto Adversarial Quarto-vs-Beamer parity QA. A critic agent compares the Quarto HTML render to the Beamer PDF benchmark fo…

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respond-to-referees Generate a structured response-to-referees document from a referee report and the revised manuscript.

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deep-audit Comprehensive adversarial audit of a theory, proof, math/econ paper, codebase, or set of claims — decompose into comp…

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interview-me Interactive interview that formalizes a fuzzy research idea into a structured spec (RQ, hypotheses, identification, d…

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verify-claims Run Chain-of-Verification (CoVe) on a draft or a block of text with factual claims. Spawns the `claim-verifier` agent…

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deploy Render Quarto `.qmd` slides to HTML and sync to `docs/` for GitHub Pages. Use when user says "deploy", "publish the s…

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learn Extract reusable knowledge from the current session into a persistent skill. Use when you discover something non-obvi…

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seven-pass-review Mechanize Pattern 15 — the seven-pass adversarial review protocol for academic manuscripts. Spawns 7 forked subagents…

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commit Stage, commit, push, open a PR, and merge to main. Use ONLY on explicit commit intent — user says "commit", "ship it"…

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new-diagram Scaffold a new TikZ diagram from the snippet gallery with prevention rules pre-applied (explicit node dimensions, coo…

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permission-check Diagnose why Claude Code is (or isn't) prompting for permission. By default reads only repo-local layers (CLI project…

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checkpoint Save a structured state snapshot before stopping or handing off. Captures the active plan, recent decisions, file poi…

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preregister Draft a structured preregistration document (OSF, AsPredicted, or AEA RCT Registry style) from a research spec or fre…

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review-paper Comprehensive manuscript review covering argument structure, econometric specification, citation completeness, and po…

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stata-replication End-to-end Stata replication pipeline — scaffolds numbered `.do` files in `scripts/stata/`, executes them via the `st…

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humanize Read-only audit of `.tex`, `.qmd`, or `.md` text for AI-voice tells — boilerplate transitions ("Moreover", "Furthermo…

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simulation-study Scaffold and run a reproducible Monte Carlo simulation study in R — a declared assumption regime, a parameterized DGP…

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compress-session Distill the current conversation into a structured note (decisions made, open questions, file pointers with line numb…

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teach-from-paper Turn a research paper into teaching materials — a lecture outline, the 3-5 results worth presenting (with intuition),…

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did-event-study Run a staggered difference-in-differences / event-study analysis to the Sant'Anna practitioner standard — drives the …

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r-package-check Run the full R package release gate — regenerate docs, run the test suite, run R CMD check --as-cran, and triage ever…

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replication-package Assemble a submission-ready replication package to the AEA Data and Code Availability Standard (DCAS) / openICPSR / S…

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scaffold-exercises Scaffold a graded problem set with sections, problems, worked solutions, and short "why this matters" explainers acro…

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syllabus Build or restructure a course syllabus from a topic list or reading list — course description + prerequisites, week-b…

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data-management-plan Draft a funder-compliant Data Management Plan (NSF DMP, NIH DMS Policy 2023, ERC, Horizon Europe) by composing the co…

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triage-inbox Triage academic email and calendar (Gmail / Google Calendar via the session's MCP) into a prioritized digest plus a r…

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capture-environment Snapshot the computational environment for a replication package — detects the analysis stack (R / Stata / Python) an…

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coauthor-brief Generate a co-author / collaborator handoff brief for a multi-author, multi-machine project — summarizing what change…

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disclosure-check Pre-screen analysis outputs (tables, figures, logs) built on restricted or confidential data for statistical-disclosu…

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grant-proposal Scaffold a research grant proposal (NSF, NIH, ERC, or foundation) by composing existing primitives — pulls identifica…

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new-skill Scaffold a new skill that follows this repo's conventions — interviews for purpose, trigger phrases, and tool needs, …

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power-analysis Compute statistical power, required sample size, and minimum detectable effect (MDE) for a study design, then write a…

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respond-to-eval Turn student course evaluations (free-text + numeric) into an actionable teaching-improvement plan — the teaching ana…

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submission-disclosures Generate the submission-time disclosure block for a manuscript — the AI-use disclosure statement matched to the targe…

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translate-to-quarto Translate Beamer LaTeX to Quarto RevealJS. Multi-phase workflow with TikZ extraction and QA.

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