Source

openai/plugins

330 skills · 4.5K combined installs

Skills from this source

#
Skill
Source
8W Activity
Installs
1
agents-sdk Build, run, deploy, and evaluate OpenAI Agents SDK apps from Codex. Use when the user asks to create or adapt an Agen…
openai/plugins
15
2
ncbi-entrez-skill Submit compact NCBI Entrez E-Utilities requests for PubMed, Gene, Protein, Nucleotide, PMC metadata, and GEO metadata…
openai/plugins
15
3
requesting-code-review Use when completing tasks, implementing major features, or before merging to verify work meets requirements
openai/plugins
15
4
subagent-driven-development Use when executing implementation plans with independent tasks in the current session
openai/plugins
15
5
writing-skills Use when creating new skills, editing existing skills, or verifying skills work before deployment
openai/plugins
15
6
build-chatgpt-app Build, scaffold, refactor, and troubleshoot ChatGPT Apps SDK applications that combine an MCP server and widget UI. U…
openai/plugins
14
7
dispatching-parallel-agents Use when facing 2+ independent tasks that can be worked on without shared state or sequential dependencies
openai/plugins
14
8
executing-plans Use when you have a written implementation plan to execute in a separate session with review checkpoints
openai/plugins
14
9
finishing-a-development-branch Use when implementation is complete, all tests pass, and you need to decide how to integrate the work
openai/plugins
14
10
ncbi-datasets-skill Submit compact NCBI Datasets v2 requests for assembly, genome, taxonomy, and related metadata endpoints. Use when a u…
openai/plugins
14
11
openai-platform-api-key Use when Codex is asked to build, run, test, debug, or configure an OpenAI-backed or provider-unspecified AI app, UI,…
openai/plugins
14
12
research-router-skill Route broad or ambiguous life-sciences research requests to the right skills, normalize core entities, optionally par…
openai/plugins
14
13
biorxiv-skill Submit compact bioRxiv and medRxiv API requests for details, publication-linkage, and DOI lookups. Use when a user wa…
openai/plugins
13
14
data-visualization Route web data visualization work. Use when the user needs chart choice, visual critique, dashboards, maps or geospat…
openai/plugins
13
15
gwas-catalog-skill Submit compact GWAS Catalog REST API v2 requests for studies, associations, SNPs, EFO traits, genes, publications, lo…
openai/plugins
13
16
ncbi-blast-skill Submit, poll, and summarize NCBI BLAST Common URL API jobs (Blast.cgi) for nucleotide or protein sequences. Use when …
openai/plugins
13
17
ncbi-clinicaltables-skill Submit compact Clinical Tables NCBI Gene requests for human gene lookup, pagination, and field selection. Use when a …
openai/plugins
13
18
ncbi-pmc-skill Submit compact NCBI PMC Open Access requests for article/file availability metadata. Use when a user wants concise PM…
openai/plugins
13
19
alphafold-skill Submit compact AlphaFold Protein Structure Database API requests for prediction, UniProt summary, sequence summary, a…
openai/plugins
12
20
android-performance Gather and interpret Android performance evidence on an adb target using Simpleperf CPU profiles, Perfetto or Compose…
openai/plugins
12
21
bgee-skill Submit compact Bgee SPARQL requests for healthy wild-type expression metadata and ontology-aware lookup patterns. Use…
openai/plugins
12
22
bindingdb-skill Submit compact BindingDB REST API requests for ligand-target binding lookups by PDB, UniProt, or similarity search. U…
openai/plugins
12
23
biobankjapan-phewas-skill Fetch compact BioBank Japan PheWAS summaries for single variants by accepting rsID, GRCh38, or GRCh37 input and resol…
openai/plugins
12
24
biostudies-arrayexpress-skill Submit compact BioStudies and ArrayExpress API requests for free-text search and accession-based study retrieval. Use…
openai/plugins
12
25
cbioportal-skill Submit compact cBioPortal API requests for studies, molecular profiles, mutations, clinical data, and samples. Use wh…
openai/plugins
12
26
cellxgene-skill Submit compact CELLxGENE Discover API requests for public collection and dataset metadata. Use when a user wants conc…
openai/plugins
12
27
chebi-skill Submit compact ChEBI 2.0 API requests for chemical search, compound lookup, ontology traversal, and structure metadat…
openai/plugins
12
28
chembl-skill Submit compact ChEMBL API requests for activity, molecule, target, mechanism, and text-search endpoints. Use when a u…
openai/plugins
12
29
civic-skill Submit compact CIViC GraphQL requests for cancer variant interpretation schema inspection and targeted evidence retri…
openai/plugins
12
30
clinicaltrials-skill Submit compact ClinicalTrials.gov API v2 requests for study search, metadata, enums, search areas, and field statisti…
openai/plugins
12
31
clinvar-variation-skill Submit compact ClinVar Clinical Tables and NCBI Variation requests for search, VCV, RCV, SCV, and RefSNP lookups. Use…
openai/plugins
12
32
efo-ontology-skill Submit compact EFO OLS4 requests for search, term lookup, children, and descendants. Use when a user wants concise EF…
openai/plugins
12
33
encode-skill Submit compact ENCODE REST API requests for object lookups, portal-style search, and metadata retrieval. Use when a u…
openai/plugins
12
34
ensembl-skill Submit compact Ensembl REST API requests for lookup, overlap, cross-reference, and variation endpoints. Use when a us…
openai/plugins
12
35
epigraphdb-skill Submit compact EpiGraphDB API requests for ontology, literature, MR, gene-drug, and support-path evidence. Use when a…
openai/plugins
12
36
eqtl-catalogue-skill Submit compact eQTL Catalogue API requests for association retrieval and documented metadata endpoints. Use when a us…
openai/plugins
12
37
eva-skill Submit compact EVA REST requests for species metadata and archived variant lookups. Use when a user wants concise Eur…
openai/plugins
12
38
finngen-phewas-skill Fetch compact FinnGen PheWAS summaries for single variants by accepting rsID, GRCh37, or GRCh38 input and resolving t…
openai/plugins
12
39
genebass-gene-burden-skill Submit compact Genebass gene burden requests for one Ensembl gene ID and one burden set. Use when a user wants concis…
openai/plugins
12
40
gnomad-graphql-skill Submit compact gnomAD GraphQL requests for frequency, gene constraint, and variant context queries. Use when a user w…
openai/plugins
12
41
gtex-eqtl-skill Fetch GTEx single-tissue eQTL associations from one variant input by accepting rsID, GRCh37, or GRCh38 input and reso…
openai/plugins
12
42
hmdb-skill Submit compact HMDB search requests for metabolites, proteins, diseases, and pathways. Use when a user wants concise …
openai/plugins
12
43
human-protein-atlas-skill Submit compact Human Protein Atlas requests for gene JSON, search downloads, and page-level tissue or cell-line looku…
openai/plugins
12
44
ipd-skill Submit compact IPD REST requests for HLA allele and cell-level metadata using the public IPD query API. Use when a us…
openai/plugins
12
45
locus-to-gene-mapper-skill Map GWAS loci to ranked candidate genes using a deterministic multi-skill chain (EFO -> GWAS -> coordinates -> Open T…
openai/plugins
12
46
metabolights-skill Submit compact MetaboLights requests for study discovery and study-level metabolomics metadata. Use when a user wants…
openai/plugins
12
47
mgnify-skill Submit compact MGnify API requests for microbiome studies, samples, and biome metadata. Use when a user wants concise…
openai/plugins
12
48
openai-api-troubleshooting Use when an OpenAI API request fails and Codex needs to classify the likely cause, explain the next step, and route t…
openai/plugins
12
49
opentargets-skill Submit compact Open Targets Platform GraphQL requests for target, disease, drug, variant, study, and search data, inc…
openai/plugins
12
50
pharmgkb-skill Submit compact PharmGKB API requests for genes, variants, clinical annotations, dosing guidelines, and search. Use wh…
openai/plugins
12
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