mims-harvard/tooluniverse

1

tooluniverse-biomedical-fact-lookup Answer biomedical FACTUAL / recall / multiple-choice questions by querying ToolUniverse database tools instead of ans…

mims-harvard/tooluniverse

65

2

tooluniverse-antigravity-plugin Install, set up, verify, update, pin, uninstall, or troubleshoot the ToolUniverse plugin on Google Antigravity (AGY /…

mims-harvard/tooluniverse

41

3

tooluniverse-gene-liability Evaluate the human safety liability of knocking down, knocking out, degrading, or pharmacologically inhibiting a gene…

mims-harvard/tooluniverse

30

4

host-and-share-remote-tool Host, validate, and privately share a user's own model, Python function, workflow, or existing Streamable HTTP MCP en…

mims-harvard/tooluniverse

15

5

setup-harmony-remote-tool Set up, launch, validate, and troubleshoot the Harmony ToolUniverse remote tool and optionally relay it through ToolU…

mims-harvard/tooluniverse

15

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setup-milo-remote-tool Set up, launch, validate, and troubleshoot the Milo ToolUniverse remote tool and optionally relay it through ToolUniv…

mims-harvard/tooluniverse

15

7

setup-monocle3-remote-tool Set up, launch, validate, and troubleshoot the Monocle 3 ToolUniverse remote tool and optionally relay it through Too…

mims-harvard/tooluniverse

15

8

setup-boltz-remote-tool Set up, launch, validate, and troubleshoot the Boltz-2 ToolUniverse remote tool and optionally relay it through ToolU…

mims-harvard/tooluniverse

14

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setup-borzoi-remote-tool Set up, launch, validate, and troubleshoot the Borzoi ToolUniverse remote tool and optionally relay it through ToolUn…

mims-harvard/tooluniverse

14

10

setup-cell2location-remote-tool Set up, launch, validate, and troubleshoot the cell2location ToolUniverse remote tool and optionally relay it through…

mims-harvard/tooluniverse

14

11

setup-cellrank-remote-tool Set up, launch, validate, and troubleshoot the CellRank ToolUniverse remote tool and optionally relay it through Tool…

mims-harvard/tooluniverse

14

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setup-celltypist-remote-tool Set up, launch, validate, and troubleshoot the CellTypist ToolUniverse remote tool and optionally relay it through To…

mims-harvard/tooluniverse

14

13

setup-chrombpnet-remote-tool Set up, launch, validate, and troubleshoot the ChromBPNet ToolUniverse remote tool and optionally relay it through To…

mims-harvard/tooluniverse

14

14

setup-depmap-24q2-remote-tool Set up, launch, validate, and troubleshoot the DepMap 24Q2 ToolUniverse remote tool and optionally relay it through T…

mims-harvard/tooluniverse

14

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setup-enformer-remote-tool Set up, launch, validate, and troubleshoot the Enformer ToolUniverse remote tool and optionally relay it through Tool…

mims-harvard/tooluniverse

14

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setup-esm-remote-tool Set up, launch, validate, and troubleshoot the ESM ToolUniverse remote tool and optionally relay it through ToolUnive…

mims-harvard/tooluniverse

14

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setup-expert-feedback-remote-tool Set up, launch, validate, and troubleshoot the Human expert feedback ToolUniverse remote tool and optionally relay it…

mims-harvard/tooluniverse

14

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setup-immune-compass-remote-tool Set up, launch, validate, and troubleshoot the immune COMPASS ToolUniverse remote tool and optionally relay it throug…

mims-harvard/tooluniverse

14

19

setup-ldsc-remote-tool Set up, launch, validate, and troubleshoot the LDSC ToolUniverse remote tool and optionally relay it through ToolUniv…

mims-harvard/tooluniverse

14

20

setup-liana-remote-tool Set up, launch, validate, and troubleshoot the LIANA ToolUniverse remote tool and optionally relay it through ToolUni…

mims-harvard/tooluniverse

14

21

setup-macs3-remote-tool Set up, launch, validate, and troubleshoot the MACS3 ToolUniverse remote tool and optionally relay it through ToolUni…

mims-harvard/tooluniverse

14

22

setup-mofa-remote-tool Set up, launch, validate, and troubleshoot the MOFA+ ToolUniverse remote tool and optionally relay it through ToolUni…

mims-harvard/tooluniverse

14

23

setup-paga-remote-tool Set up, launch, validate, and troubleshoot the PAGA ToolUniverse remote tool and optionally relay it through ToolUniv…

mims-harvard/tooluniverse

14

24

setup-pinnacle-remote-tool Set up, launch, validate, and troubleshoot the PINNACLE ToolUniverse remote tool and optionally relay it through Tool…

mims-harvard/tooluniverse

14

25

setup-scanvi-remote-tool Set up, launch, validate, and troubleshoot the scANVI ToolUniverse remote tool and optionally relay it through ToolUn…

mims-harvard/tooluniverse

14

26

setup-scrublet-remote-tool Set up, launch, validate, and troubleshoot the Scrublet ToolUniverse remote tool and optionally relay it through Tool…

mims-harvard/tooluniverse

14

27

setup-scvelo-remote-tool Set up, launch, validate, and troubleshoot the scVelo ToolUniverse remote tool and optionally relay it through ToolUn…

mims-harvard/tooluniverse

14

28

setup-scvi-remote-tool Set up, launch, validate, and troubleshoot the scVI ToolUniverse remote tool and optionally relay it through ToolUniv…

mims-harvard/tooluniverse

14

29

setup-singler-remote-tool Set up, launch, validate, and troubleshoot the SingleR ToolUniverse remote tool and optionally relay it through ToolU…

mims-harvard/tooluniverse

14

30

setup-slingshot-remote-tool Set up, launch, validate, and troubleshoot the Slingshot ToolUniverse remote tool and optionally relay it through Too…

mims-harvard/tooluniverse

14

31

setup-squidpy-remote-tool Set up, launch, validate, and troubleshoot the Squidpy ToolUniverse remote tool and optionally relay it through ToolU…

mims-harvard/tooluniverse

14

32

setup-tangram-remote-tool Set up, launch, validate, and troubleshoot the Tangram ToolUniverse remote tool and optionally relay it through ToolU…

mims-harvard/tooluniverse

14

33

setup-transcriptformer-remote-tool Set up, launch, validate, and troubleshoot the TranscriptFormer ToolUniverse remote tool and optionally relay it thro…

mims-harvard/tooluniverse

14

34

setup-uspto-downloader-remote-tool Set up, launch, validate, and troubleshoot the USPTO downloader ToolUniverse remote tool and optionally relay it thro…

mims-harvard/tooluniverse

14

35

tooluniverse-nih-funding-landscape Analyze NIH grant portfolios and funding history using the OpenNIH FY1985-present corpus, then connect grants to inve…

mims-harvard/tooluniverse

9

36

Metabolomics Research Comprehensive metabolomics research skill for identifying metabolites, analyzing studies, and searching metabolomics …

mims-harvard/tooluniverse

5

37

tooluniverse-fastq-qc FASTQ quality control and adapter/quality-trimming decisions with local NGS tools — run FastQC on raw reads, summariz…

mims-harvard/tooluniverse

1

38

tooluniverse-phewas Cross-ancestry / cross-biobank phenome-wide association (PheWAS) and replication. Given ONE variant (rsID) or ONE gen…

mims-harvard/tooluniverse

1