mims-harvard/tooluniverse

tooluniverse-product-safety-surveillance

>- Post-market safety surveillance and recall/adverse-event RETRIEVAL across the full spectrum of FDA-regulated products that are NOT covered by the drug-AE signal skills: medical devices, food / dietary supplements / cosmetics, veterinary drugs, and drug supply (shortages). Orchestrates openFDA endpoints (MAUDE device adverse events + device recalls + 510(k), CAERS food/supplement/ cosmetic adverse events, veterinary adverse events, drug shortages, and cross-product enforcement/recall reports)…

First seen Jun 12, 2026

Installation

$ npx skills add mims-harvard/tooluniverse --skill tooluniverse-product-safety-surveillance

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License LICENSE
Default branch main
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Package contents

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  • skill md SKILL.md 15,987 B
  • docs SUMMARY.md 1,263 B

History

  1. First seen on skills.sh
  2. First recorded snapshot · 101 installs

SKILL.md

Product Safety Surveillance (multi-product, openFDA)

Retrieve and interpret post-market safety records across every FDA-regulated product class except drug-AE signal mining: medical devices, food / dietary supplements / cosmetics, veterinary drugs, and drug supply (shortages), plus cross-product enforcement/recall reports.

KEY PRINCIPLES

  1. Decide the product class first. Device? Food/supplement/cosmetic? Vet drug? Drug shortage? Recall? The class picks the tool.
  2. Build a valid Lucene query. openFDA uses field-scoped field:value terms; combine with a space-separated AND. Phrases and special characters need care (see Query Grammar).
  3. Retrieve, then interpret. These are spontaneous/voluntary reports. Report the records and their fields; never assert causation or rates.
  4. Cite every record with the tool name, the openFDA endpoint, the query used, and the total hit count from meta.results.total.
  5. Stay in scope. If the request is drug-AE signal detection (PRR/ROR/IC), STOP and point to tooluniverse-pharmacovigilance / tooluniverse-adverse-event-detection.

When to Use vs When NOT to Use

USE for:

  • Device adverse events (MAUDE): "adverse events / malfunctions / deaths for [device]"
  • Device recalls & enforcement: "device recalls for [firm]", "Class I device recalls"
  • Device clearance context: "510(k) clearances for [device type]"
  • Food / dietary-supplement / cosmetic adverse events (CAERS): "supplement reactions", "cosmetic adverse events for [brand]"
  • Food recalls/enforcement: "food recall for listeria / undeclared allergen"
  • Veterinary drug adverse events: "adverse events for [drug] in dogs"
  • Drug shortages: "is [drug] in shortage", "injectables on current shortage"
  • Drug recalls/enforcement: "drug recalls for contamination"

DO NOT USE for (point elsewhere):

  • Drug adverse-event SIGNAL detection / disproportionality (PRR, ROR, IC) → tooluniverse-pharmacovigilance or tooluniverse-adverse-event-detection
  • Drug-AE association strength scoring, demographic risk stratification of drug AEs → same two skills
  • Drug efficacy, mechanism, pharmacogenomics → other tooluniverse-* skills

This skill retrieves and interprets multi-product safety records. It does not compute drug-AE signal statistics.


Tool Map (which tool for which question)

Product class Question Tool openFDA endpoint
Device Adverse events / malfunctions / deaths (MAUDE) OpenFDAsearchdeviceadverseevents /device/event.json
Device Recalls OpenFDAsearchdevice_recalls /device/recall.json
Device Enforcement / recall reports OpenFDAsearchdevice_enforcement /device/enforcement.json
Device 510(k) clearances (context) OpenFDAsearchdevice_510k /device/510k.json
Food/supplement/cosmetic Adverse events (CAERS) OpenFDAsearchfoodadverseevents /food/event.json
Food Enforcement / recall reports OpenFDAsearchfood_enforcement /food/enforcement.json
Veterinary Animal drug adverse events OpenFDAsearchanimalvetadverseevents /animalandveterinary/event.json
Drug supply Shortages OpenFDAsearchdrug_shortages /drug/shortages.json
Drug Enforcement / recall reports OpenFDAsearchdrug_enforcement /drug/enforcement.json
Drug Adverse events (raw FAERS records) OpenFDAsearchdrug_events /drug/event.json
Drug Labels OpenFDAsearchdrug_labels /drug/label.json

All tools take a Lucene search string plus optional limit and skip. All are keyless and verified live.


openFDA Query Grammar (CRITICAL — read before querying)

  • Field-scoped term: field:value (e.g. event_type:Death, status:Current).
  • Nested fields use dot paths: device.genericname:pacemaker, products.industryname:Cosmetics, animal.species:Dog, reaction.veddratermname:Vomiting, drug.active_ingredients.name:carprofen.
  • Combine terms with a SPACE-separated AND (verified working): device.genericname:pacemaker AND eventtype:Death.

- Do NOT use +AND+ — the +-joined boolean form errors through these tools. Use a literal space around AND.

  • Multi-word values: join with + only for adjacency within a single field value (e.g. device.generic_name:infusion+pump). This is matched as tokens, not an exact phrase.
  • Avoid raw special characters ((, ), /, leading +) inside values — they break the query. Pick a simpler token (e.g. products.industry_name:Dietary instead of the full Dietary Conventional Foods/Meal Replacements).
  • Dates are strings: device AE/MAUDE use YYYYMMDD (e.g. datereceived); recalls/enforcement use YYYY-MM-DD (e.g. eventdateinitiated, recallinitiation_date).
  • Result envelope: every successful call returns {status:"success", data:{meta:{results:{total, skip, limit}}, results:[...]}}. Read the hit count from data.meta.results.total.
  • Counts/aggregations: native openFDA supports &count=<field>; these TU wrappers center on search. To rank terms, retrieve a batch (e.g. limit:100) and tally the field yourself in Python.

Interpretation Tables (raw openFDA field → meaning)

Medical devices — MAUDE adverse events (/device/event.json)

Field Meaning
event_type Death, Injury, Malfunction, or No answer provided. Death/Injury = patient harm; Malfunction = device failure without (reported) harm.
device[].genericname / device[].brandname Device category / trade name.
device[].manufacturerdname Device manufacturer.
patient[] Patient-level outcome data (may be sparse).
mdr_text[].text Narrative; texttypecode distinguishes event description vs manufacturer narrative.
report_number MAUDE report id. Duplicate / follow-up reports of the same event are common — do not count reports as distinct events.
date_received YYYYMMDD FDA received date.

Medical devices — recalls (/device/recall.json)

Field Meaning
product_description What was recalled.
recalling_firm Firm issuing the recall.
recall_status e.g. Open, Terminated. Terminated = FDA closed the action.
product_code FDA device product code.
k_numbers[] Associated 510(k) clearance numbers.
rootcausedescription FDA root-cause category (e.g. Labeling design).
eventdateinitiated YYYY-MM-DD recall start.

Enforcement reports (device / drug / food /.../enforcement.json)

Field Meaning
classification Recall severity: Class I (serious/fatal hazard), Class II (temporary/reversible), Class III (unlikely to cause harm).
status Ongoing / Terminated / Completed.
reasonforrecall Why recalled.
product_description Recalled product.
recalling_firm Firm.

Food / supplement / cosmetic — CAERS adverse events (/food/event.json)

Field Meaning
reactions[] MedDRA reaction terms (British spelling, e.g. Diarrhoea, Nausea).
outcomes[] e.g. Hospitalization, Life Threatening, Disability, Death, Other Serious or Important Medical Event, Visited an ER.
products[].industry_name Product category (Cosmetics, Dietary Conventional Foods/Meal Replacements, Milk/Butter/Dried Milk Prod, …).
products[].role SUSPECT (implicated) vs CONCOMITANT (also consumed).
products[].name_brand Brand name.
consumer age, gender of the consumer (often sparse).

Veterinary — animal drug adverse events (/animalandveterinary/event.json)

Field Meaning
animal.species Dog, Cat, Horse, …
animal.gender Animal sex.
numberofanimals_affected Count in the report.
reaction[].veddratermname VeDDRA clinical sign (e.g. Vomiting, Diarrhoea).
drug[].brandname / drug[].activeingredients[].name Implicated product / active.
drug[].usedaccordingtolabel / offlabel_use Label vs off-label use.

Drug shortages (/drug/shortages.json)

Field Meaning
status Current or Resolved.
availability e.g. Unavailable, Limited.
generic_name Drug in shortage.
shortage_reason e.g. Delay in shipping of the drug, Demand increase for the drug.
dosage_form e.g. Injection, Tablet.
therapeutic_category[] Clinical category.
company_name Manufacturer.
updatetype / initialpostingdate / updatedate Posting metadata.

Workflow

  1. Classify the product from the request (device / food-supplement-cosmetic / vet / drug shortage / recall).
  2. Pick the tool from the Tool Map.
  3. Build the Lucene query following Query Grammar (single field for a first pass; add AND for combinations). Keep values simple; avoid special characters.
  4. Run it and read data.meta.results.total and data.results[].
  5. Interpret the fields with the table above. For severity: device event_type:Death; enforcement classification:Class I; CAERS outcomes:Death/Hospitalization; shortage status:Current.
  6. Summarize and cite. Report counts, key fields, the query used, and the LIMITATIONS caveat. To rank terms, pull limit:100 and tally in Python (no count aggregation in these wrappers).
  7. If out of scope (drug-AE signal/PRR/ROR), stop and route to the pharmacovigilance skills.

Worked Examples (verified live)

Example 1 — Device deaths for a device type (MAUDE)

"Are there any reported deaths in adverse-event reports for pacemakers?"

OpenFDA_search_device_adverse_events {"search":"device.generic_name:pacemaker AND event_type:Death","limit":1}

Real output (abbrev): status:success, meta.results.total = 16619; first record eventtype = Death, device.genericname = DEFIBRILLATOR/PACEMAKER. Interpretation: 16,619 MAUDE reports match a pacemaker device with a Death event type. These are spontaneous reports — duplicates likely, and "Death" means a death was reported in temporal association, not that the device caused it.

Example 2 — Device recalls for a firm

"What device recalls has Medtronic Navigation issued?"

OpenFDA_search_device_recalls {"search":"recalling_firm:Medtronic","limit":1}

Real output (abbrev): total = 1896; first record recallstatus = Terminated, productcode = HAW, rootcausedescription = Labeling design, knumbers = ["K990214"], eventdateinitiated = 2011-01-20, productdescription = a tactile probe for spine surgery. Interpretation: 1,896 recall records match firms containing "Medtronic". recall_status: Terminated means FDA has closed this action; the root cause was a labeling-design issue.

Example 3 — Drug shortage lookup for an injectable

"Is ketorolac injection in shortage right now?"

OpenFDA_search_drug_shortages {"search":"dosage_form:Injection AND status:Current","limit":1}

Real output (abbrev): total = 799; first record genericname = Ketorolac Tromethamine Injection, status = Current, shortagereason = Delay in shipping of the drug, availability = Unavailable, company_name = Fresenius Kabi USA, LLC. Interpretation: 799 current shortage records are injectables; ketorolac tromethamine injection is currently in shortage (status Current, availability Unavailable) due to a shipping delay.

Example 4 — Supplement / cosmetic CAERS reactions

"Are there CAERS adverse-event reports implicating cosmetics?"

OpenFDA_search_food_adverse_events {"search":"products.industry_name:Cosmetics","limit":1}

Real output (abbrev): total = 52214; first record products[].industry_name = Cosmetics, products[].role = SUSPECT, outcomes = ["Hospitalization","Other Serious or Important Medical Event"]. Interpretation: 52,214 CAERS reports name a cosmetic product as SUSPECT. CAERS is voluntary; a SUSPECT role reflects the reporter's attribution, not a verified causal link.

Example 5 — Veterinary adverse events for a drug in a species

"What adverse events are reported for carprofen in dogs?"

OpenFDA_search_animalvet_adverse_events {"search":"drug.active_ingredients.name:carprofen AND animal.species:Dog","limit":1}

Real output (abbrev): total = 46469; first record animal.species = Dog, reaction[].veddratermname includes Leucocytosis NOS, Neutrophilia, Depression, Elevated alanine aminotransferase (ALT). Interpretation: 46,469 veterinary reports match carprofen-containing products in dogs. VeDDRA terms describe reported clinical signs; counts reflect reporting, not incidence.


Limitations (state these in every report)

  • Spontaneous / voluntary reports. MAUDE (device), CAERS (food/supplement/cosmetic), FAERS (drug), and the animal/vet system are passive surveillance. Reports are unverified and a report is not a confirmed causal event.
  • No causation, no denominator. Counts (meta.results.total) are report counts, not incidence or rates. There is no exposure denominator, so you cannot compute risk.
  • Reporting bias. Serious events, new products, recalls, and media/regulatory attention drive reporting spikes (Weber effect). High counts may reflect usage volume or attention, not hazard.
  • Duplicate reports. MAUDE in particular contains follow-up/duplicate reports of the same event; do not treat report counts as event counts.
  • CAERS voluntary & sparse. Consumer/age/gender fields are often missing; SUSPECT role is reporter attribution.
  • This skill does not compute signal statistics (PRR/ROR/IC). For drug-AE disproportionality use tooluniverse-pharmacovigilance / tooluniverse-adverse-event-detection.
  • Data currency: each response carries a meta.last_updated date; openFDA lags real-world events.

See references/openfda_fields.md for the full per-endpoint field reference and additional query examples.


References