k-dense-ai/scientific-agent-skills
qiime2-amplicon
Processes paired-end 16S amplicon reads into QIIME 2 ASVs and taxonomy with retained artifact provenance. Checks paired FASTQ manifests, primer orientation diagnostics, predicted post-trimming overlap, sample IDs, runtime versions and read retention, and guides selection of compatible taxonomic classifiers.
Installation
npx skills add https://github.com/k-dense-ai/scientific-agent-skills
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npx skills add k-dense-ai/scientific-agent-skills
More details
Agent compatibility
Declared targets from SKILL.md / docs. Unmarked agents are not listed — the skill may still install via the CLI.
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