jaechang-hits/sciagent-skills
pysam-genomic-files
Read/write SAM/BAM/CRAM, VCF/BCF, FASTA/FASTQ. Region queries, pileup, variant filtering, read groups. Python htslib wrapper exposing samtools/bcftools CLI. Use STAR/BWA for alignment; GATK/DeepVariant for variant calling.
Installation
npx skills add https://github.com/jaechang-hits/sciagent-skills
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npx skills add https://github.com/jaechang-hits/sciagent-skills
More details
Agent compatibility
Declared targets from SKILL.md / docs. Unmarked agents are not listed — the skill may still install via the CLI.
Repository health
main
History
- First seen on skills.sh
- First recorded snapshot · 34 installs