htlin222/dotfiles

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quarto-netlify Quarto + Netlify Deployment Setup. Use when setting up a Quarto project for Netlify deployment with RevealJS presenta…

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sc Unified SuperClaude workflow with subcommands. Use for structured development workflows.

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sc-analyze Analyze code quality, security, performance, and architecture. Use when user asks to analyze code, review codebase he…

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sc-estimate Provide development estimates for tasks, features, or projects. Use when user asks for time estimates, effort assessm…

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sc-load Load and analyze project context, configurations, and dependencies. Use when starting work on a project, understandin…

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update-dev-docs Update dev docs before compaction. Use before ending sessions or switching tasks.

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sc-implement Feature and code implementation with intelligent persona activation and MCP integration. Use when user asks to implem…

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sc-improve Apply systematic improvements to code quality, performance, and maintainability. Use when refactoring code, cleaning …

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sc-spawn Break complex tasks into coordinated subtasks with efficient execution. Use when handling large multi-step tasks, orc…

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sentient Manage, organize and ships your codebase. Use to test Claude Code hook blocking for dangerous commands.

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context-report Analyze Claude Code context efficiency. Use when evaluating session token usage.

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hook Enable, disable, and manage Claude Code hooks. Use for hook debugging or configuration.

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research-plan-implement Three-phase RPI workflow (Research, Plan, Implement). Use for non-trivial code changes.

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sc-build Build, compile, and package projects with error handling and optimization. Use when user needs to build, compile, or …

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sc-cleanup Clean up code, remove dead code, and optimize project structure. Use when user wants to clean codebase, remove unused…

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sc-design Design system architecture, APIs, and component interfaces. Use when user needs architectural design, API design, or …

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sc-explain Provide clear explanations of code, concepts, or system behavior. Use when user asks to explain code, understand beha…

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sc-index Generate comprehensive project documentation and knowledge base. Use when creating docs, API documentation, project s…

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sc-task Execute complex tasks with intelligent workflow management and cross-session persistence. Use when managing large pro…

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sc-troubleshoot Diagnose and resolve issues in code, builds, or system behavior. Use when debugging errors, investigating build failu…

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sc-workflow Generate structured implementation workflows from PRDs and feature requirements with expert guidance. Use when planni…

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all_tools List All Tools. Use when user wants to see available tools or needs a tool reference.

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course Data science course generator. Invoke when creating task-based data science courses or tutorials.

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git_status Understand the current state of the git repository. Use when user wants to check git status or before making commits.

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harsh complete a comprehensive and brutally honest critical review of your manuscript. The review identifies major methodol…

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sc-document Create focused documentation for specific components or features. Use when user needs documentation for code, APIs, o…

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sc-git Git operations with intelligent commit messages and branch management. Use when user needs git operations, commits, o…

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sc-test Execute tests, generate test reports, and maintain test coverage. Use when running tests, checking coverage, or setti…

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codefocus CodeFocus for Quarto Revealjs. Use when creating presentations with progressive code highlighting.

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retro Session retrospective report. Use when reviewing or summarizing a work session.

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slidev Create and present web-based slides for developers using Markdown, Vue components, code highlighting, animations, and…

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vale Run Vale prose linter and auto-fix issues. Use when linting or proofreading markdown/text.

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zettel Converts narrative medical text into Pocket Medicine bullet-style notes with proper abbreviations, then modularizes s…

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care-check Use when auditing a case report or case series manuscript against the CARE checklist. Triggers on case reports, rare …

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qing Qing dynasty court roleplay mode. Activates imperial court persona for all agent responses. Use when user wants to en…

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consort-check Use when auditing a randomized controlled trial manuscript against the CONSORT 2025 checklist. Triggers on RCTs, rand…

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strobe-check Use when auditing an observational study manuscript (cohort, case-control, or cross-sectional) against the STROBE che…

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tripod-check Use when auditing a prediction model or clinical AI manuscript against the TRIPOD+AI checklist. Triggers on predictio…

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visualization-check Use when reviewing a data visualization or figure for clarity, checking if a graph communicates its message without a…

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mail Read Mail.app inboxes and create Reminders for actionable items. Use for email triage.

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vm-docker Deploy Docker services on VM with Traefik and Homepage. Use for VM container deploys.

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end-to-end-study End-to-end data-first research pipeline — find an underutilised public dataset, pick the publishable claim, target a …

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env-dx Scan environment for dev readiness — tools, runtimes, permissions. Use in new containers.

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remote-docker-nas Use when running Docker containers on a remote NAS or server via SSH without a local Docker daemon, when the remote h…

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repo-init Initialize GitHub repo with CITATION.cff, LICENSE, README badges. Use for new repos.

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funnel-config Manage Tailscale Funnel routes. Use when configuring tunnels or external HTTPS access.

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publish-the-skill Publish a skill folder as a .skill package to GitHub. Use when distributing skills.

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todoist Todoist CRUD via API v1 — tasks (due + deadline), projects, sections, labels, comments, reminders. Use when user ment…

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argdown Author and iterate on `.argdown` argument-map files. Use when the user asks to "create an argdown", structure a debat…

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codex-imagegen Generate an image via Codex CLI (OpenAI gpt-image-1) and save to a local path. Use when user asks to create/draw/gene…

htlin222/dotfiles

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