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dblp-search Computer science bibliography via DBLP API. Use when: user asks about CS publications, author publication lists, or v…

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deep-research-swarm COPYRIGHT NOTICE

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energy-systems Analyzes energy systems including renewable energy resource assessment, power grid modeling, battery storage optimiza…

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medical-qa Medical question answering using structured biomedical knowledge bases and clinical datasets

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ml-pipeline Machine learning pipeline for scientific research including data preprocessing, feature engineering, model selection,…

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networkx Comprehensive toolkit for creating, analyzing, and visualizing complex networks and graphs in Python. Use when workin…

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nlp-analysis Natural language processing for research including text mining, sentiment analysis, topic modeling, named entity reco…

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obsidian Work with Obsidian vaults (plain Markdown notes) and automate via obsidian-cli.

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openai-whisper Local speech-to-text with the Whisper CLI (no API key).

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pdf-processing-pro Production-ready PDF processing with forms, tables, OCR, validation, and batch operations. Use when working with comp…

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pymatgen-materials Materials science computation with pymatgen. Use when: (1) crystal structure creation and manipulation, (2) phase dia…

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quantum-computing Designs and analyzes quantum computing solutions including quantum circuit construction, algorithm implementation, er…

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scienceclaw-ie Extract structured information from scientific texts: entities, relations, data tables, methods, results. Use when: (…

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scienceclaw-qa Answer scientific questions across all disciplines with evidence-based responses and citations. Use when: (1) user as…

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scienceclaw-retrieval Retrieve scientific information from databases, literature, and knowledge bases. Use when: (1) finding relevant paper…

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scientific-critical-thinking Evaluate scientific claims and evidence quality. Use for assessing experimental design validity, identifying biases a…

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scientific-schematics Create publication-quality scientific diagrams using Nano Banana 2 AI with smart iterative refinement. Uses Gemini 3.…

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ssrn-econpapers Search social science research papers across SSRN, RePEc/IDEAS, CrossRef, and Semantic Scholar. Use when: (1) finding…

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systematic-review Orchestrates a systematic review and meta-analysis workflow following PRISMA 2020 guidelines, from protocol developme…

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chembl-database Query ChEMBL bioactive molecules and drug discovery data. Search compounds by structure/properties, retrieve bioactiv…

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citation-management Comprehensive citation management for academic research. Search Google Scholar and PubMed for papers, extract accurat…

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clinical-trial Designs and analyzes clinical trials including sample size calculation, randomization schemes, endpoint selection, CO…

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clinvar-database Query NCBI ClinVar for variant clinical significance. Search by gene/position, interpret pathogenicity classification…

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code-execution Execute scientific Python code for computation, data analysis, simulation, and verification. Use when: (1) running st…

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code-science Scientific programming best practices including reproducible research, computational notebooks, version control for r…

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data-transform Transform, clean, reshape, and preprocess data using pandas and numpy. Works with ANY LLM provider (GPT, Gemini, Clau…

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experimental-design Design rigorous scientific experiments with power analysis and controls. Use when: user needs to plan an experiment, …

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exploratory-data-analysis Perform comprehensive exploratory data analysis on scientific data files across 200+ file formats. This skill should …

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generate-image Generate or edit images using AI models (FLUX, Nano Banana 2). Use for general-purpose image generation including pho…

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geo-database Access NCBI GEO for gene expression/genomics data. Search/download microarray and RNA-seq datasets (GSE, GSM, GPL), r…

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hypothesis-gen Structured hypothesis generation workflow. Use when: user needs to formulate testable scientific hypotheses from obse…

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information-extraction Extract structured entities, relations, and clauses from scientific and legal documents

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latex-posters Create professional research posters in LaTeX using beamerposter, tikzposter, or baposter. Support for conference pre…

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lean4-prover Lean 4 theorem prover for formal verification. Use when: formal theorem proving, mathematical verification, proof sea…

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legal-analysis Analyze legal contracts, extract clauses, and perform legal research with structured frameworks

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linguistics-analysis Analyze language structures, typological features, and semantic change across languages

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materials-screening Orchestrates a materials screening workflow from database search through property filtering to stability assessment a…

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mesh-generation Plan and evaluate mesh generation for numerical simulations. Use when choosing grid resolution, checking aspect ratio…

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meta-analysis Perform quantitative meta-analysis with effect size calculation, forest plots, funnel plots, and heterogeneity assess…

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networkx-social Social network and graph analysis via NetworkX. Use when: graph analysis, community detection, centrality measures, n…

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nonlinear-solvers Select and configure nonlinear solvers for f(x)=0 or min F(x). Use for Newton methods, quasi-Newton (BFGS, L-BFGS), B…

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openalex-database Query and analyze scholarly literature using the OpenAlex database. This skill should be used when searching for acad…

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openalex-search Open academic metadata via OpenAlex API. Use when: user needs author profiles, institution data, concept mapping, or …

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paper-writing Write scientific papers following IMRaD structure with proper citations. Use when: user asks to draft or improve a sc…

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patent-analysis Conducts patent landscape analysis including prior art searches, patent claim interpretation, freedom-to-operate asse…

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pdf Use this skill whenever the user wants to do anything with PDF files. This includes reading or extracting text/tables…

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peer-review Conducts structured peer review of scientific manuscripts including methodological evaluation, statistical assessment…

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performance-profiling Identify computational bottlenecks, analyze scaling behavior, estimate memory requirements, and receive optimization …

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pubmed-search Search PubMed/MEDLINE for biomedical literature via NCBI E-utilities API. Use when: (1) searching medical/biomedical …

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scienceclaw-reasoning Perform multi-step scientific reasoning, proof construction, causal inference, and logical argumentation. Use when: (…

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