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aperivue/medsci-skills

59 skills · 5K combined installs

Skills from this source

#
Skill
Source
8W Activity
Installs
1
meta-analysis Systematic review and meta-analysis pipeline for medical research. Covers protocol registration (PROSPERO), search st…
aperivue/medsci-skills
123
2
make-figures Generate publication-ready figures and visual abstracts for medical research papers. Supports ROC curves, forest plot…
aperivue/medsci-skills
113
3
check-reporting Check manuscript compliance with medical research reporting guidelines. Supports 49 guidelines including STROBE, STRO…
aperivue/medsci-skills
112
4
analyze-stats Statistical analysis for medical research papers. Generates reproducible Python/R code with publication-ready tables …
aperivue/medsci-skills
107
5
verify-refs Audit-only verification of manuscript references against PubMed and CrossRef. Detects fabricated or mismatched citati…
aperivue/medsci-skills
104
6
search-lit Literature search and citation management for medical research. Searches PubMed, Semantic Scholar, and bioRxiv/medRxi…
aperivue/medsci-skills
103
7
find-journal Journal recommendation engine for medical manuscripts. 2-pass matching against a curated public profile library plus …
aperivue/medsci-skills
102
8
present-paper Academic presentation preparation — paper-driven (journal club, grand rounds, seminar) and lecture/teaching decks (co…
aperivue/medsci-skills
102
9
write-paper Full-pipeline medical/scientific paper writing. 8-phase IMRAD workflow from outline to submission-ready manuscript. S…
aperivue/medsci-skills
101
10
calc-sample-size Interactive sample size calculator for medical research. Decision-tree guided test selection, reproducible R/Python c…
aperivue/medsci-skills
97
11
self-review Pre-submission self-review for the user's own manuscripts, applying a reviewer perspective. Systematic check across 1…
aperivue/medsci-skills
97
12
humanize Detect and remove AI writing patterns from academic manuscripts and response-to-reviewers letters. Scans for 27 commo…
aperivue/medsci-skills
96
13
design-study Study design and validity review for radiology and medical AI research. Identifies analysis unit, cohort logic, leaka…
aperivue/medsci-skills
95
14
manage-refs Cross-cutting reference manager for medical manuscripts. Single entry point for citation-key validation, journal-CSL …
aperivue/medsci-skills
94
15
write-protocol IRB/ethics committee research protocol generator. Produces 4 core sections (Background, Study Design, Sample Size, St…
aperivue/medsci-skills
94
16
deidentify De-identify clinical research data before LLM-assisted analysis. Standalone Python CLI detects PHI via regex + heuris…
aperivue/medsci-skills
93
17
fill-icmje-coi Batch-generate per-author ICMJE Conflict of Interest Disclosure Forms (`coi_disclosure.docx`) for manuscript submissi…
aperivue/medsci-skills
93
18
fulltext-retrieval Batch download open-access PDFs by DOI using legitimate OA APIs (Unpaywall, PMC, OpenAlex, Crossref). Optional PDF→Ma…
aperivue/medsci-skills
93
19
orchestrate General-purpose research orchestrator. Routes ambiguous or multi-step requests to the right skill(s) from the medsci-…
aperivue/medsci-skills
93
20
peer-review Peer review assistant for medical journals. Generates structured review drafts with journal-specific formatting. Cons…
aperivue/medsci-skills
93
21
revise Parse peer reviewer comments and generate a structured Response to Reviewers document with tracked manuscript changes…
aperivue/medsci-skills
93
22
fill-protocol Fill institutional Word form templates (.doc/.docx) for IRB protocols, ethics applications, grant proposals, and othe…
aperivue/medsci-skills
92
23
find-cohort-gap Research gap finder for longitudinal cohort databases. Profiles cohort strengths, matches PI expertise, scans literat…
aperivue/medsci-skills
91
24
intake-project Intake and normalize a new radiology research project. Classifies project type, summarizes current state, identifies …
aperivue/medsci-skills
91
25
render-pdf-doc Render academic Markdown documents (English or Korean) to publication-quality PDF via pandoc + xelatex. Targets non-b…
aperivue/medsci-skills
91
26
academic-aio Medical AI paper optimization for AI search engines (Perplexity, ChatGPT web, Elicit, Consensus, SciSpace) and RAG-ba…
aperivue/medsci-skills
90
27
batch-cohort Generate N analysis scripts from a single methodology template × multiple exposure/outcome combinations. The "80-pers…
aperivue/medsci-skills
90
28
clean-data Interactive data profiling and cleaning assistant for medical research. Three-stage workflow (profile, flag, code-gen…
aperivue/medsci-skills
90
29
grant-builder Grant and challenge proposal support for radiology and medical AI projects. Structures significance, innovation, appr…
aperivue/medsci-skills
90
30
ma-scout Meta-analysis topic discovery and feasibility assessment. Professor-first (profile → gap) or Topic-first (question → …
aperivue/medsci-skills
90
31
replicate-study Replicate an existing cohort study's methodology on a different database. Extracts study design from a source paper, …
aperivue/medsci-skills
90
32
add-journal Add a new journal to the MedSci Skills profile database. Extracts metadata from author guidelines, generates write-pa…
aperivue/medsci-skills
89
33
author-strategy PubMed author profile analysis. Author name → PubMed fetch → study-type classification → visualization → strategy rep…
aperivue/medsci-skills
89
34
define-variables Literature-grounded variable operationalization for observational research. Turns a data dictionary + research questi…
aperivue/medsci-skills
89
35
lit-sync Sync research references from .bib files to Zotero library + Obsidian literature notes. Extract cross-cutting concept…
aperivue/medsci-skills
89
36
cross-national End-to-end cross-national comparison study using KNHANES + NHANES + CHNS (or other parallel surveys). Variable harmon…
aperivue/medsci-skills
88
37
publish-skill Convert a personal agent skill into a distributable, open-source-ready skill. Runs PII audit, generalization, license…
aperivue/medsci-skills
88
38
sync-submission Audit SSOT-to-submission drift and create journal submission manifests from canonical manuscript artifacts.
aperivue/medsci-skills
88
39
polish-language Academic English consistency linting and non-native (ESL) language polish for medical manuscripts. Deterministically …
aperivue/medsci-skills
87
40
setup-medsci Diagnostic checklist for the MedSci Skills runtime. Verifies Python, R, Node, Claude Code, Git, Zotero, and configure…
aperivue/medsci-skills
85
41
review-paper Scaffold and draft medical/AI literature reviews (narrative, scoping PRISMA-ScR, or systematic). Asks for the spine a…
aperivue/medsci-skills
84
42
design-ai-benchmarking Design and validity review for studies that benchmark one or more AI systems against a human-expert panel as the refe…
aperivue/medsci-skills
82
43
generate-codebook Generate a citable data dictionary / codebook from a tabular dataset (CSV/TSV/Excel/Parquet/Stata/SAS). Profiles ever…
aperivue/medsci-skills
82
44
version-dataset Dataset version control for research reproducibility. Builds a deterministic content-hash manifest of a dataset (file…
aperivue/medsci-skills
82
45
manage-project Research project management for medical manuscripts. Scaffold project structure, track writing progress across phases…
aperivue/medsci-skills
68
46
model-validation Design or audit the clinical-validation study for an engineer-built medical-imaging model (segmentation, classificati…
aperivue/medsci-skills
66
47
model-card Generate the documentation an engineer-built medical-imaging model must carry — a Model Card (Mitchell et al. 2019), …
aperivue/medsci-skills
65
48
model-evaluation Compute and report task-correct held-out metrics for a trained medical-imaging model — segmentation (Dice plus a boun…
aperivue/medsci-skills
64
49
model-scaffold Generate a reproducible, runnable PyTorch training repo for a medical-imaging task — segmentation, classification, de…
aperivue/medsci-skills
64
50
architecture-zoo Choose a model architecture for a medical-imaging research question before scaffolding. Maps the task (classification…
aperivue/medsci-skills
63
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